PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_016299-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 538aa    MW: 59049.5 Da    PI: 7.1182
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_016299-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.50.000554354671855
                    HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +++ +L++++ +      +K + a++L +A+ YIk Lq
  NNU_016299-RA 435 DKITTLQQIVSPF-----GKTDTASVLLEAIGYIKFLQ 467
                    7888999999887.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.54417466IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-9432482IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.9E-8432475IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.20E-4435471No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    Send to blast
MYVITKGSIA YKFPTHQRKE KKPKIEHPSE HKVDLVGGGM AEEGSEGSVA TPTTTALNWW  60
ESHNNSLSSW NSTAPWPLTN PNSNSSCDED ISISTSFTNA SNHSGLSVDS SRQIVEPASS  120
GELMGEPTSE NHLWSQVLLS VGSNGELNSG QDVGENFLGG LSSKNISSEM FEPACDYLKK  180
MDGGWEYTNS TSFNNLEKQF SGFNGNLVEN ERLTNLSNLV SNWSIAPPDS QADRQITLPT  240
CNISLNSSLD QYSDPEFSQM KQNPSNPSLY VVAGNRNPSF MPCYGHNMKV ESQHQELDSS  300
RASFQRQLSN NGLGHQTGLN NSILGDNSRY YHGMTDTRLS NTRNLLSFSG CLSKPLLDFQ  360
ASKPSLKASN SLESKKQGHD SLSLAKGNGR GTAIANEGKK KRSEDTSDTN PKKPKHETPT  420
AASVKVQATK VKLGDKITTL QQIVSPFGKT DTASVLLEAI GYIKFLQEQV QLLSNPYMKS  480
NANKDPWGTL ERKDKGEAKL DLKSRGLCLV PISCTPQIYR ENTGSDYWTP TYRGCLYR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010270771.10.0PREDICTED: transcription factor bHLH111 isoform X1
TrEMBLD7TAI80.0D7TAI8_VITVI; Putative uncharacterized protein
STRINGVIT_01s0010g02070.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.11e-69bHLH family protein